Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx4Q7TNK1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx4Q7TNK1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfx4Q7TNK1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Gm38205-201ENSMUST00000192243 258 ntBASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfx4Q7TNK1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.14■□□□□ 0.34
Rfx4Q7TNK1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfx4Q7TNK1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfx4Q7TNK1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms