Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CtifQ6PEE2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
CtifQ6PEE2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CtifQ6PEE2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CtifQ6PEE2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.07■□□□□ 0.64
CtifQ6PEE2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
CtifQ6PEE2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CtifQ6PEE2 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.05■□□□□ 0.64
CtifQ6PEE2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.05■□□□□ 0.64
CtifQ6PEE2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CtifQ6PEE2 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.04■□□□□ 0.64
CtifQ6PEE2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CtifQ6PEE2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.03■□□□□ 0.64
CtifQ6PEE2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CtifQ6PEE2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.02■□□□□ 0.64
CtifQ6PEE2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CtifQ6PEE2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CtifQ6PEE2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.02■□□□□ 0.63
CtifQ6PEE2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CtifQ6PEE2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms