Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.82■■□□□ 1.08
Col11a2Q64739 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col11a2Q64739 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Col11a2Q64739 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col11a2Q64739 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col11a2Q64739 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.82■■□□□ 1.08
Col11a2Q64739 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col11a2Q64739 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col11a2Q64739 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Col11a2Q64739 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col11a2Q64739 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col11a2Q64739 AW822252-206ENSMUST00000208904 237 ntBASIC21.8■■□□□ 1.08
Col11a2Q64739 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC21.8■■□□□ 1.08
Col11a2Q64739 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.8■■□□□ 1.08
Col11a2Q64739 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Col11a2Q64739 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.8■■□□□ 1.08
Col11a2Q64739 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col11a2Q64739 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Col11a2Q64739 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col11a2Q64739 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col11a2Q64739 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.79■■□□□ 1.08
Col11a2Q64739 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC21.79■■□□□ 1.08
Col11a2Q64739 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC21.79■■□□□ 1.08
Col11a2Q64739 Gm29791-202ENSMUST00000207888 369 ntBASIC21.79■■□□□ 1.08
Col11a2Q64739 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.79■■□□□ 1.08
Col11a2Q64739 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col11a2Q64739 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.79■■□□□ 1.08
Col11a2Q64739 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Col11a2Q64739 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Col11a2Q64739 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.78■■□□□ 1.08
Col11a2Q64739 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col11a2Q64739 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.77■■□□□ 1.08
Col11a2Q64739 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Col11a2Q64739 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col11a2Q64739 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.77■■□□□ 1.07
Col11a2Q64739 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Col11a2Q64739 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Col11a2Q64739 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.76■■□□□ 1.07
Col11a2Q64739 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Col11a2Q64739 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Col11a2Q64739 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col11a2Q64739 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC21.75■■□□□ 1.07
Col11a2Q64739 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.75■■□□□ 1.07
Col11a2Q64739 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Col11a2Q64739 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col11a2Q64739 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.75■■□□□ 1.07
Col11a2Q64739 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Col11a2Q64739 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Col11a2Q64739 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col11a2Q64739 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col11a2Q64739 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Col11a2Q64739 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Col11a2Q64739 Actl10-202ENSMUST00000226583 1501 ntBASIC21.73■■□□□ 1.07
Col11a2Q64739 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Col11a2Q64739 Tgds-204ENSMUST00000228543 1594 ntBASIC21.73■■□□□ 1.07
Col11a2Q64739 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Col11a2Q64739 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms