Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
AtmQ62388 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
AtmQ62388 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.96■□□□□ 0.31
AtmQ62388 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.96■□□□□ 0.31
AtmQ62388 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.96■□□□□ 0.31
AtmQ62388 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AtmQ62388 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AtmQ62388 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
AtmQ62388 Mir3081-201ENSMUST00000175305 84 ntBASIC16.95■□□□□ 0.3
AtmQ62388 Mir8098-201ENSMUST00000184011 137 ntBASIC16.95■□□□□ 0.3
AtmQ62388 Gm7063-201ENSMUST00000186840 981 ntBASIC16.95■□□□□ 0.3
AtmQ62388 Gm43347-201ENSMUST00000200226 580 ntBASIC16.95■□□□□ 0.3
AtmQ62388 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AtmQ62388 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.95■□□□□ 0.3
AtmQ62388 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
AtmQ62388 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AtmQ62388 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
AtmQ62388 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.95■□□□□ 0.3
AtmQ62388 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
AtmQ62388 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
AtmQ62388 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
AtmQ62388 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.94■□□□□ 0.3
AtmQ62388 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AtmQ62388 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AtmQ62388 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
AtmQ62388 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AtmQ62388 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
AtmQ62388 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AtmQ62388 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AtmQ62388 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.93■□□□□ 0.3
AtmQ62388 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.93■□□□□ 0.3
AtmQ62388 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AtmQ62388 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AtmQ62388 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AtmQ62388 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.92■□□□□ 0.3
AtmQ62388 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AtmQ62388 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Mir2861-201ENSMUST00000175539 82 ntBASIC16.92■□□□□ 0.3
AtmQ62388 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.92■□□□□ 0.3
AtmQ62388 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.92■□□□□ 0.3
AtmQ62388 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
AtmQ62388 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
AtmQ62388 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.92■□□□□ 0.3
AtmQ62388 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.91■□□□□ 0.3
AtmQ62388 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.91■□□□□ 0.3
AtmQ62388 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
AtmQ62388 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AtmQ62388 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AtmQ62388 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.9■□□□□ 0.3
AtmQ62388 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AtmQ62388 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.9■□□□□ 0.3
AtmQ62388 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms