Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Six3Q62233 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Six3Q62233 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Six3Q62233 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Six3Q62233 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.45■□□□□ 0.38
Six3Q62233 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.45■□□□□ 0.38
Six3Q62233 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.45■□□□□ 0.38
Six3Q62233 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Six3Q62233 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Six3Q62233 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.44■□□□□ 0.38
Six3Q62233 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.44■□□□□ 0.38
Six3Q62233 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Six3Q62233 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.43■□□□□ 0.38
Six3Q62233 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Six3Q62233 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.43■□□□□ 0.38
Six3Q62233 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Six3Q62233 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Six3Q62233 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Six3Q62233 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Idnk-204ENSMUST00000226010 1898 ntBASIC17.42■□□□□ 0.38
Six3Q62233 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.42■□□□□ 0.38
Six3Q62233 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Six3Q62233 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Six3Q62233 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.41■□□□□ 0.38
Six3Q62233 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Gm6211-202ENSMUST00000167849 925 ntBASIC17.41■□□□□ 0.38
Six3Q62233 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.41■□□□□ 0.38
Six3Q62233 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Six3Q62233 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.41■□□□□ 0.38
Six3Q62233 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms