Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox17Q61473 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Gm8969-201ENSMUST00000199694 526 ntBASIC16.79■□□□□ 0.28
Sox17Q61473 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.79■□□□□ 0.28
Sox17Q61473 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Sox17Q61473 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sox17Q61473 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.79■□□□□ 0.28
Sox17Q61473 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sox17Q61473 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox17Q61473 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sox17Q61473 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.78■□□□□ 0.28
Sox17Q61473 Gm21956-201ENSMUST00000179946 522 ntBASIC16.78■□□□□ 0.28
Sox17Q61473 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sox17Q61473 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.78■□□□□ 0.28
Sox17Q61473 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sox17Q61473 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox17Q61473 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.77■□□□□ 0.28
Sox17Q61473 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Sox17Q61473 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.77■□□□□ 0.28
Sox17Q61473 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sox17Q61473 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sox17Q61473 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sox17Q61473 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox17Q61473 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox17Q61473 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox17Q61473 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sox17Q61473 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Sox17Q61473 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.76■□□□□ 0.27
Sox17Q61473 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox17Q61473 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Sox17Q61473 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Gm8493-201ENSMUST00000196881 489 ntBASIC16.76■□□□□ 0.27
Sox17Q61473 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox17Q61473 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox17Q61473 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.75■□□□□ 0.27
Sox17Q61473 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Sox17Q61473 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.75■□□□□ 0.27
Sox17Q61473 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.75■□□□□ 0.27
Sox17Q61473 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Sox17Q61473 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox17Q61473 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms