Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Clcn4Q61418 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Clcn4Q61418 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Clcn4Q61418 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn4Q61418 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.22
Clcn4Q61418 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Clcn4Q61418 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn4Q61418 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn4Q61418 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.45■□□□□ 0.22
Clcn4Q61418 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.45■□□□□ 0.22
Clcn4Q61418 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Clcn4Q61418 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.45■□□□□ 0.22
Clcn4Q61418 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.45■□□□□ 0.22
Clcn4Q61418 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn4Q61418 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Clcn4Q61418 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Clcn4Q61418 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.45■□□□□ 0.22
Clcn4Q61418 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.44■□□□□ 0.22
Clcn4Q61418 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Clcn4Q61418 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Clcn4Q61418 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.43■□□□□ 0.22
Clcn4Q61418 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Fst-202ENSMUST00000223640 2612 ntBASIC16.43■□□□□ 0.22
Clcn4Q61418 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.43■□□□□ 0.22
Clcn4Q61418 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Clcn4Q61418 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Clcn4Q61418 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn4Q61418 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Clcn4Q61418 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.42■□□□□ 0.22
Clcn4Q61418 Gm7290-201ENSMUST00000104990 617 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Gm12918-201ENSMUST00000120234 636 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Gm15710-201ENSMUST00000121821 636 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Gm5075-201ENSMUST00000196916 622 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.42■□□□□ 0.22
Clcn4Q61418 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Clcn4Q61418 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Clcn4Q61418 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Clcn4Q61418 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.41■□□□□ 0.22
Clcn4Q61418 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Clcn4Q61418 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms