Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sim1Q61045 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sim1Q61045 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sim1Q61045 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sim1Q61045 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sim1Q61045 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.71■□□□□ 0.43
Sim1Q61045 Gm30025-201ENSMUST00000218555 728 ntBASIC17.71■□□□□ 0.43
Sim1Q61045 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sim1Q61045 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sim1Q61045 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sim1Q61045 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sim1Q61045 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sim1Q61045 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sim1Q61045 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.7■□□□□ 0.42
Sim1Q61045 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Sim1Q61045 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Sim1Q61045 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.7■□□□□ 0.42
Sim1Q61045 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sim1Q61045 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sim1Q61045 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Sim1Q61045 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Sim1Q61045 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.69■□□□□ 0.42
Sim1Q61045 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sim1Q61045 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sim1Q61045 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
Sim1Q61045 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.68■□□□□ 0.42
Sim1Q61045 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.68■□□□□ 0.42
Sim1Q61045 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.68■□□□□ 0.42
Sim1Q61045 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Sim1Q61045 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.68■□□□□ 0.42
Sim1Q61045 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
Sim1Q61045 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Sim1Q61045 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Sim1Q61045 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.67■□□□□ 0.42
Sim1Q61045 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Flg-201ENSMUST00000050758 1488 ntBASIC17.67■□□□□ 0.42
Sim1Q61045 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.67■□□□□ 0.42
Sim1Q61045 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sim1Q61045 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.66■□□□□ 0.42
Sim1Q61045 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sim1Q61045 Gm27741-201ENSMUST00000185060 237 ntBASIC17.66■□□□□ 0.42
Sim1Q61045 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sim1Q61045 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms