Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Col12a1Q60847 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Col12a1Q60847 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col12a1Q60847 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col12a1Q60847 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Col12a1Q60847 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col12a1Q60847 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Col12a1Q60847 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Olfr129-201ENSMUST00000122318 993 ntBASIC17.74■□□□□ 0.43
Col12a1Q60847 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col12a1Q60847 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.74■□□□□ 0.43
Col12a1Q60847 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Col12a1Q60847 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Gm7638-201ENSMUST00000121348 967 ntBASIC17.73■□□□□ 0.43
Col12a1Q60847 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col12a1Q60847 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.72■□□□□ 0.43
Col12a1Q60847 Gm2651-201ENSMUST00000203560 838 ntBASIC17.72■□□□□ 0.43
Col12a1Q60847 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col12a1Q60847 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Col12a1Q60847 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.72■□□□□ 0.43
Col12a1Q60847 Gm7213-201ENSMUST00000215977 950 ntBASIC17.72■□□□□ 0.43
Col12a1Q60847 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Col12a1Q60847 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col12a1Q60847 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.71■□□□□ 0.43
Col12a1Q60847 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.71■□□□□ 0.43
Col12a1Q60847 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.71■□□□□ 0.43
Col12a1Q60847 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.71■□□□□ 0.43
Col12a1Q60847 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Col12a1Q60847 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col12a1Q60847 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Col12a1Q60847 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.71■□□□□ 0.42
Col12a1Q60847 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Col12a1Q60847 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.7■□□□□ 0.42
Col12a1Q60847 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Gm11594-201ENSMUST00000122313 162 ntBASIC17.7■□□□□ 0.42
Col12a1Q60847 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.7■□□□□ 0.42
Col12a1Q60847 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col12a1Q60847 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col12a1Q60847 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Col12a1Q60847 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.7■□□□□ 0.42
Col12a1Q60847 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col12a1Q60847 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms