Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-4Q5R1I0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-4Q5R1I0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Mir1199-201ENSMUST00000117015 119 ntBASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Mir2861-201ENSMUST00000175539 82 ntBASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-4Q5R1I0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-4Q5R1I0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Gm37292-201ENSMUST00000192062 758 ntBASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Fst-202ENSMUST00000223640 2612 ntBASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-4Q5R1I0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Gm12382-201ENSMUST00000122005 922 ntBASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-4Q5R1I0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms