Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav3-3Q5R1C3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Gm5812-201ENSMUST00000061073 957 ntBASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav3-3Q5R1C3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav3-3Q5R1C3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Gm15546-201ENSMUST00000122095 826 ntBASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav3-3Q5R1C3 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trav3-3Q5R1C3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav3-3Q5R1C3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms