Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clhc1Q5M6W3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clhc1Q5M6W3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clhc1Q5M6W3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clhc1Q5M6W3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clhc1Q5M6W3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clhc1Q5M6W3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clhc1Q5M6W3 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms