Protein–RNA interactions for Protein: Q5KU39

Vps41, Vacuolar protein sorting-associated protein 41 homolog, mousemouse

Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps41Q5KU39 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Gm13146-201ENSMUST00000118508 780 ntBASIC18.67■□□□□ 0.58
Vps41Q5KU39 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vps41Q5KU39 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Vps41Q5KU39 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Vps41Q5KU39 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Vps41Q5KU39 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Vps41Q5KU39 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Vps41Q5KU39 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Vps41Q5KU39 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Vps41Q5KU39 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Vps41Q5KU39 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.64■□□□□ 0.57
Vps41Q5KU39 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Gm13534-201ENSMUST00000121169 513 ntBASIC18.63■□□□□ 0.57
Vps41Q5KU39 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Vps41Q5KU39 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.62■□□□□ 0.57
Vps41Q5KU39 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Vps41Q5KU39 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps41Q5KU39 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps41Q5KU39 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps41Q5KU39 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps41Q5KU39 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Vps41Q5KU39 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms