Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nr1d1Q3UV55 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nr1d1Q3UV55 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Gm7860-201ENSMUST00000121190 879 ntBASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nr1d1Q3UV55 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1d1Q3UV55 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1d1Q3UV55 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1d1Q3UV55 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1d1Q3UV55 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nr1d1Q3UV55 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.83■□□□□ 0.6
Nr1d1Q3UV55 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nr1d1Q3UV55 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nr1d1Q3UV55 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nr1d1Q3UV55 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms