Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nlrc4Q3UP24 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Gm18025-201ENSMUST00000221733 862 ntBASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.81■□□□□ 0.6
Nlrc4Q3UP24 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Gm42545-201ENSMUST00000202755 922 ntBASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nlrc4Q3UP24 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Gm15378-201ENSMUST00000121894 207 ntBASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nlrc4Q3UP24 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nlrc4Q3UP24 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.77■□□□□ 0.6
Nlrc4Q3UP24 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nlrc4Q3UP24 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nlrc4Q3UP24 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Gm37292-201ENSMUST00000192062 758 ntBASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nlrc4Q3UP24 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nlrc4Q3UP24 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Nlrc4Q3UP24 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nlrc4Q3UP24 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms