Protein–RNA interactions for Protein: Q3U4K9

Gm11110, Predicted gene 11110, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11110Q3U4K9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Gm11110Q3U4K9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.23■□□□□ 0.03
Gm11110Q3U4K9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gm11110Q3U4K9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gm11110Q3U4K9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Gm11110Q3U4K9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gm11110Q3U4K9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gm11110Q3U4K9 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms