Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3KNL4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3KNL4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3KNL4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.59■□□□□ 0.41
Q3KNL4 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Q3KNL4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Q3KNL4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Q3KNL4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Tgds-204ENSMUST00000228543 1594 ntBASIC17.58■□□□□ 0.41
Q3KNL4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Q3KNL4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Q3KNL4 Gm18671-201ENSMUST00000214826 683 ntBASIC17.58■□□□□ 0.4
Q3KNL4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Q3KNL4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Q3KNL4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Q3KNL4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Q3KNL4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Q3KNL4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.57■□□□□ 0.4
Q3KNL4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Q3KNL4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Q3KNL4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.57■□□□□ 0.4
Q3KNL4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Q3KNL4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.57■□□□□ 0.4
Q3KNL4 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Q3KNL4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Q3KNL4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.56■□□□□ 0.4
Q3KNL4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.56■□□□□ 0.4
Q3KNL4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.56■□□□□ 0.4
Q3KNL4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.56■□□□□ 0.4
Q3KNL4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Q3KNL4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.56■□□□□ 0.4
Q3KNL4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Q3KNL4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q3KNL4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Q3KNL4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Q3KNL4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Q3KNL4 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.54■□□□□ 0.4
Q3KNL4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Q3KNL4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.54■□□□□ 0.4
Q3KNL4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.54■□□□□ 0.4
Q3KNL4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Q3KNL4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
Q3KNL4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Q3KNL4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms