Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim63Q38HM4 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim63Q38HM4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim63Q38HM4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim63Q38HM4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim63Q38HM4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.83□□□□□ -0.03
Trim63Q38HM4 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim63Q38HM4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim63Q38HM4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim63Q38HM4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim63Q38HM4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim63Q38HM4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms