Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdx4Q07424 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cdx4Q07424 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cdx4Q07424 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.83□□□□□ -0.2
Cdx4Q07424 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdx4Q07424 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.82□□□□□ -0.2
Cdx4Q07424 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cdx4Q07424 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cdx4Q07424 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cdx4Q07424 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Cdx4Q07424 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cdx4Q07424 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.81□□□□□ -0.2
Cdx4Q07424 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.81□□□□□ -0.2
Cdx4Q07424 AC160393.1-201ENSMUST00000218378 1279 ntBASIC13.81□□□□□ -0.2
Cdx4Q07424 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Cdx4Q07424 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cdx4Q07424 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.8□□□□□ -0.2
Cdx4Q07424 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.8□□□□□ -0.2
Cdx4Q07424 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cdx4Q07424 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.8□□□□□ -0.2
Cdx4Q07424 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Cdx4Q07424 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.8□□□□□ -0.2
Cdx4Q07424 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.79□□□□□ -0.2
Cdx4Q07424 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cdx4Q07424 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cdx4Q07424 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms