Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.25□□□□□ -0.29
Hspg2Q05793 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Hspg2Q05793 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hspg2Q05793 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Gm7370-201ENSMUST00000219471 767 ntBASIC13.25□□□□□ -0.29
Hspg2Q05793 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hspg2Q05793 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.24□□□□□ -0.29
Hspg2Q05793 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Hspg2Q05793 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.24□□□□□ -0.29
Hspg2Q05793 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Mzt1-203ENSMUST00000227948 952 ntBASIC13.24□□□□□ -0.29
Hspg2Q05793 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Gm15794-201ENSMUST00000120182 631 ntBASIC13.24□□□□□ -0.29
Hspg2Q05793 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.24□□□□□ -0.29
Hspg2Q05793 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hspg2Q05793 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Gm27525-201ENSMUST00000184465 107 ntBASIC13.23□□□□□ -0.29
Hspg2Q05793 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hspg2Q05793 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm10566-201ENSMUST00000086739 996 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Iqck-206ENSMUST00000208658 2891 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm25016-201ENSMUST00000158399 131 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm29518-201ENSMUST00000190858 372 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm5587-201ENSMUST00000206270 674 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.22□□□□□ -0.29
Hspg2Q05793 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Hspg2Q05793 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Hspg2Q05793 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Hspg2Q05793 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Hspg2Q05793 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.21□□□□□ -0.29
Hspg2Q05793 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.21□□□□□ -0.29
Hspg2Q05793 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Hspg2Q05793 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Hspg2Q05793 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hspg2Q05793 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hspg2Q05793 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Hspg2Q05793 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms