Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.87■□□□□ 0.29
Nkx3-2P97503 Gm38285-201ENSMUST00000192928 922 ntBASIC16.87■□□□□ 0.29
Nkx3-2P97503 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.87■□□□□ 0.29
Nkx3-2P97503 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nkx3-2P97503 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.86■□□□□ 0.29
Nkx3-2P97503 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx3-2P97503 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.86■□□□□ 0.29
Nkx3-2P97503 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Nkx3-2P97503 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nkx3-2P97503 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Mir1199-201ENSMUST00000117015 119 ntBASIC16.84■□□□□ 0.29
Nkx3-2P97503 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Gm10138-203ENSMUST00000206952 366 ntBASIC16.84■□□□□ 0.29
Nkx3-2P97503 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.84■□□□□ 0.29
Nkx3-2P97503 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nkx3-2P97503 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx3-2P97503 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx3-2P97503 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nkx3-2P97503 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.83■□□□□ 0.28
Nkx3-2P97503 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.83■□□□□ 0.28
Nkx3-2P97503 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Nkx3-2P97503 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx3-2P97503 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms