Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Shox2P70390 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.7■□□□□ 0.42
Shox2P70390 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Shox2P70390 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Shox2P70390 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.69■□□□□ 0.42
Shox2P70390 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Shox2P70390 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Shox2P70390 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.69■□□□□ 0.42
Shox2P70390 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.69■□□□□ 0.42
Shox2P70390 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.69■□□□□ 0.42
Shox2P70390 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Shox2P70390 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Shox2P70390 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.68■□□□□ 0.42
Shox2P70390 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Shox2P70390 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.68■□□□□ 0.42
Shox2P70390 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Spcs1-204ENSMUST00000226782 949 ntBASIC17.68■□□□□ 0.42
Shox2P70390 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Shox2P70390 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.68■□□□□ 0.42
Shox2P70390 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.67■□□□□ 0.42
Shox2P70390 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Shox2P70390 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shox2P70390 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.67■□□□□ 0.42
Shox2P70390 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Shox2P70390 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Shox2P70390 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Shox2P70390 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Shox2P70390 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.66■□□□□ 0.42
Shox2P70390 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.66■□□□□ 0.42
Shox2P70390 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.66■□□□□ 0.42
Shox2P70390 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Shox2P70390 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Shox2P70390 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Shox2P70390 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Shox2P70390 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Gm27801-201ENSMUST00000184174 223 ntBASIC17.65■□□□□ 0.42
Shox2P70390 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Shox2P70390 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms