Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.44■□□□□ 0.7
Frat1P70339 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.44■□□□□ 0.7
Frat1P70339 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Frat1P70339 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Frat1P70339 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Frat1P70339 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Frat1P70339 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.42■□□□□ 0.7
Frat1P70339 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Frat1P70339 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Frat1P70339 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.42■□□□□ 0.7
Frat1P70339 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.42■□□□□ 0.7
Frat1P70339 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Frat1P70339 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.42■□□□□ 0.7
Frat1P70339 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.42■□□□□ 0.7
Frat1P70339 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Frat1P70339 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.42■□□□□ 0.7
Frat1P70339 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.41■□□□□ 0.7
Frat1P70339 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Frat1P70339 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.41■□□□□ 0.7
Frat1P70339 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Frat1P70339 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Frat1P70339 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Frat1P70339 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.4■□□□□ 0.7
Frat1P70339 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.4■□□□□ 0.7
Frat1P70339 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Frat1P70339 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Frat1P70339 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Frat1P70339 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.39■□□□□ 0.69
Frat1P70339 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.39■□□□□ 0.69
Frat1P70339 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Frat1P70339 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Frat1P70339 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.38■□□□□ 0.69
Frat1P70339 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.38■□□□□ 0.69
Frat1P70339 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.38■□□□□ 0.69
Frat1P70339 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.38■□□□□ 0.69
Frat1P70339 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Frat1P70339 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Frat1P70339 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Frat1P70339 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms