Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim4P70271 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.87□□□□□ -0.03
Pdlim4P70271 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.87□□□□□ -0.03
Pdlim4P70271 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.87□□□□□ -0.03
Pdlim4P70271 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.87□□□□□ -0.03
Pdlim4P70271 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pdlim4P70271 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pdlim4P70271 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.86□□□□□ -0.03
Pdlim4P70271 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pdlim4P70271 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Gm2399-201ENSMUST00000104944 225 ntBASIC14.85□□□□□ -0.03
Pdlim4P70271 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.85□□□□□ -0.03
Pdlim4P70271 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pdlim4P70271 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pdlim4P70271 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Gm2559-201ENSMUST00000201323 363 ntBASIC14.84□□□□□ -0.03
Pdlim4P70271 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pdlim4P70271 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pdlim4P70271 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim4P70271 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pdlim4P70271 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pdlim4P70271 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pdlim4P70271 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim4P70271 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pdlim4P70271 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Pdlim4P70271 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim4P70271 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.83□□□□□ -0.04
Pdlim4P70271 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Pdlim4P70271 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pdlim4P70271 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pdlim4P70271 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pdlim4P70271 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.82□□□□□ -0.04
Pdlim4P70271 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms