Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Traf6P70196 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf6P70196 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Traf6P70196 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Traf6P70196 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Traf6P70196 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Traf6P70196 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Traf6P70196 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Traf6P70196 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf6P70196 Gm7291-201ENSMUST00000199147 382 ntBASIC17.58■□□□□ 0.4
Traf6P70196 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf6P70196 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf6P70196 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf6P70196 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Traf6P70196 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Traf6P70196 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Traf6P70196 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.57■□□□□ 0.4
Traf6P70196 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Traf6P70196 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.57■□□□□ 0.4
Traf6P70196 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Gm27405-201ENSMUST00000184201 112 ntBASIC17.57■□□□□ 0.4
Traf6P70196 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.57■□□□□ 0.4
Traf6P70196 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.57■□□□□ 0.4
Traf6P70196 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.57■□□□□ 0.4
Traf6P70196 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Traf6P70196 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Traf6P70196 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Traf6P70196 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.56■□□□□ 0.4
Traf6P70196 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.56■□□□□ 0.4
Traf6P70196 Gm26571-201ENSMUST00000181399 666 ntBASIC17.56■□□□□ 0.4
Traf6P70196 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Traf6P70196 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Traf6P70196 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Traf6P70196 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.56■□□□□ 0.4
Traf6P70196 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.55■□□□□ 0.4
Traf6P70196 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Traf6P70196 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Gm22325-201ENSMUST00000158904 308 ntBASIC17.55■□□□□ 0.4
Traf6P70196 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Traf6P70196 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 AV356131-201ENSMUST00000206201 750 ntBASIC17.55■□□□□ 0.4
Traf6P70196 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.55■□□□□ 0.4
Traf6P70196 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Traf6P70196 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Traf6P70196 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.55■□□□□ 0.4
Traf6P70196 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Traf6P70196 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Traf6P70196 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Traf6P70196 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.54■□□□□ 0.4
Traf6P70196 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Traf6P70196 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Traf6P70196 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Traf6P70196 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Traf6P70196 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms