Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ThraP63058 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ThraP63058 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
ThraP63058 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.08■□□□□ 0.49
ThraP63058 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ThraP63058 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ThraP63058 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.08■□□□□ 0.49
ThraP63058 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ThraP63058 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.08■□□□□ 0.48
ThraP63058 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.08■□□□□ 0.48
ThraP63058 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ThraP63058 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ThraP63058 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.08■□□□□ 0.48
ThraP63058 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ThraP63058 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ThraP63058 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
ThraP63058 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
ThraP63058 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ThraP63058 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Gm12896-201ENSMUST00000118430 226 ntBASIC18.07■□□□□ 0.48
ThraP63058 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
ThraP63058 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ThraP63058 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ThraP63058 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ThraP63058 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.06■□□□□ 0.48
ThraP63058 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ThraP63058 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ThraP63058 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ThraP63058 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ThraP63058 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.05■□□□□ 0.48
ThraP63058 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ThraP63058 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.05■□□□□ 0.48
ThraP63058 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ThraP63058 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.05■□□□□ 0.48
ThraP63058 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.05■□□□□ 0.48
ThraP63058 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ThraP63058 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.04■□□□□ 0.48
ThraP63058 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ThraP63058 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ThraP63058 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.04■□□□□ 0.48
ThraP63058 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ThraP63058 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.03■□□□□ 0.48
ThraP63058 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.03■□□□□ 0.48
ThraP63058 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.03■□□□□ 0.48
ThraP63058 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ThraP63058 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.03■□□□□ 0.48
ThraP63058 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms