Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp46P62069 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp46P62069 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp46P62069 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp46P62069 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp46P62069 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Usp46P62069 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.66■□□□□ 0.58
Usp46P62069 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.66■□□□□ 0.58
Usp46P62069 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.66■□□□□ 0.58
Usp46P62069 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.66■□□□□ 0.58
Usp46P62069 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Usp46P62069 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp46P62069 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp46P62069 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp46P62069 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp46P62069 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Usp46P62069 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.65■□□□□ 0.58
Usp46P62069 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Usp46P62069 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp46P62069 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Gm37292-201ENSMUST00000192062 758 ntBASIC18.65■□□□□ 0.58
Usp46P62069 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp46P62069 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.65■□□□□ 0.58
Usp46P62069 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp46P62069 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
Usp46P62069 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp46P62069 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp46P62069 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp46P62069 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Usp46P62069 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp46P62069 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp46P62069 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp46P62069 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp46P62069 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.63■□□□□ 0.57
Usp46P62069 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp46P62069 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp46P62069 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp46P62069 Mir2861-201ENSMUST00000175539 82 ntBASIC18.63■□□□□ 0.57
Usp46P62069 Mir6349-201ENSMUST00000184059 97 ntBASIC18.63■□□□□ 0.57
Usp46P62069 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp46P62069 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Usp46P62069 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.63■□□□□ 0.57
Usp46P62069 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp46P62069 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.62■□□□□ 0.57
Usp46P62069 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp46P62069 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Usp46P62069 Mir7071-201ENSMUST00000184847 69 ntBASIC18.62■□□□□ 0.57
Usp46P62069 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp46P62069 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Usp46P62069 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Usp46P62069 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
Usp46P62069 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Usp46P62069 Gm37055-201ENSMUST00000191866 133 ntBASIC18.61■□□□□ 0.57
Usp46P62069 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms