Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.27■□□□□ 0.52
Tubgcp3P58854 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubgcp3P58854 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubgcp3P58854 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubgcp3P58854 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tubgcp3P58854 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.26■□□□□ 0.51
Tubgcp3P58854 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tubgcp3P58854 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tubgcp3P58854 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tubgcp3P58854 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.23■□□□□ 0.51
Tubgcp3P58854 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tubgcp3P58854 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tubgcp3P58854 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Gm12933-201ENSMUST00000120203 872 ntBASIC18.21■□□□□ 0.51
Tubgcp3P58854 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tubgcp3P58854 Gm26524-201ENSMUST00000192339 390 ntBASIC18.21■□□□□ 0.51
Tubgcp3P58854 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.21■□□□□ 0.51
Tubgcp3P58854 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tubgcp3P58854 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms