Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.98■□□□□ 0.79
Tpm1P58771 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Tpm1P58771 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tpm1P58771 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.97■□□□□ 0.79
Tpm1P58771 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.97■□□□□ 0.79
Tpm1P58771 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.97■□□□□ 0.79
Tpm1P58771 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.97■□□□□ 0.79
Tpm1P58771 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Tpm1P58771 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Tpm1P58771 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Tpm1P58771 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Tpm1P58771 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.96■□□□□ 0.79
Tpm1P58771 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.96■□□□□ 0.79
Tpm1P58771 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tpm1P58771 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.95■□□□□ 0.78
Tpm1P58771 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Tpm1P58771 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Gm26833-201ENSMUST00000180899 440 ntBASIC19.95■□□□□ 0.78
Tpm1P58771 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.95■□□□□ 0.78
Tpm1P58771 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tpm1P58771 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.94■□□□□ 0.78
Tpm1P58771 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.94■□□□□ 0.78
Tpm1P58771 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tpm1P58771 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.93■□□□□ 0.78
Tpm1P58771 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.93■□□□□ 0.78
Tpm1P58771 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
Tpm1P58771 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.93■□□□□ 0.78
Tpm1P58771 Gm40848-201ENSMUST00000221998 324 ntBASIC19.93■□□□□ 0.78
Tpm1P58771 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.93■□□□□ 0.78
Tpm1P58771 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Tpm1P58771 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Tpm1P58771 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms