Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdkn2bP55271 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.14■□□□□ 0.33
Cdkn2bP55271 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.14■□□□□ 0.33
Cdkn2bP55271 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.14■□□□□ 0.33
Cdkn2bP55271 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdkn2bP55271 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdkn2bP55271 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.13■□□□□ 0.33
Cdkn2bP55271 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdkn2bP55271 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Cdkn2bP55271 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Gm42778-201ENSMUST00000199644 553 ntBASIC17.11■□□□□ 0.33
Cdkn2bP55271 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdkn2bP55271 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.1■□□□□ 0.33
Cdkn2bP55271 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdkn2bP55271 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Gm10493-201ENSMUST00000097270 612 ntBASIC17.09■□□□□ 0.33
Cdkn2bP55271 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdkn2bP55271 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkn2bP55271 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkn2bP55271 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Cdkn2bP55271 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkn2bP55271 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdkn2bP55271 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms