Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx4P53776 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.13■□□□□ 0.01
Lhx4P53776 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx4P53776 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Lhx4P53776 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.13■□□□□ 0.01
Lhx4P53776 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Lhx4P53776 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lhx4P53776 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx4P53776 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.12■□□□□ 0.01
Lhx4P53776 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.12■□□□□ 0.01
Lhx4P53776 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.12■□□□□ 0.01
Lhx4P53776 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.12■□□□□ 0.01
Lhx4P53776 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lhx4P53776 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Lhx4P53776 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Lhx4P53776 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lhx4P53776 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Lhx4P53776 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.11■□□□□ 0.01
Lhx4P53776 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Lhx4P53776 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lhx4P53776 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.1■□□□□ 0.01
Lhx4P53776 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.1■□□□□ 0.01
Lhx4P53776 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lhx4P53776 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.1■□□□□ 0.01
Lhx4P53776 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lhx4P53776 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.1■□□□□ 0.01
Lhx4P53776 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lhx4P53776 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.09■□□□□ 0.01
Lhx4P53776 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Lhx4P53776 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.09■□□□□ 0.01
Lhx4P53776 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.09■□□□□ 0.01
Lhx4P53776 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx4P53776 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx4P53776 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.09■□□□□ 0.01
Lhx4P53776 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lhx4P53776 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lhx4P53776 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms