Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lbx1P52955 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Lbx1P52955 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lbx1P52955 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Lbx1P52955 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Lbx1P52955 Gm7213-201ENSMUST00000215977 950 ntBASIC17.28■□□□□ 0.36
Lbx1P52955 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.28■□□□□ 0.36
Lbx1P52955 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.28■□□□□ 0.36
Lbx1P52955 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lbx1P52955 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Lbx1P52955 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.27■□□□□ 0.36
Lbx1P52955 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.27■□□□□ 0.36
Lbx1P52955 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Gm45328-201ENSMUST00000210942 917 ntBASIC17.27■□□□□ 0.36
Lbx1P52955 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.27■□□□□ 0.36
Lbx1P52955 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lbx1P52955 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Lbx1P52955 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lbx1P52955 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lbx1P52955 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Lbx1P52955 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lbx1P52955 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lbx1P52955 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Lbx1P52955 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lbx1P52955 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lbx1P52955 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.26■□□□□ 0.35
Lbx1P52955 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lbx1P52955 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.25■□□□□ 0.35
Lbx1P52955 Gm2756-201ENSMUST00000195851 400 ntBASIC17.25■□□□□ 0.35
Lbx1P52955 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.25■□□□□ 0.35
Lbx1P52955 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Lbx1P52955 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lbx1P52955 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.25■□□□□ 0.35
Lbx1P52955 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lbx1P52955 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.24■□□□□ 0.35
Lbx1P52955 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Lbx1P52955 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.24■□□□□ 0.35
Lbx1P52955 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.24■□□□□ 0.35
Lbx1P52955 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lbx1P52955 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lbx1P52955 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms