Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RoraP51448 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RoraP51448 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RoraP51448 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RoraP51448 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RoraP51448 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RoraP51448 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.89■□□□□ 0.29
RoraP51448 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RoraP51448 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.89■□□□□ 0.29
RoraP51448 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.89■□□□□ 0.29
RoraP51448 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RoraP51448 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.89■□□□□ 0.29
RoraP51448 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RoraP51448 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.88■□□□□ 0.29
RoraP51448 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RoraP51448 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RoraP51448 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Gm43183-201ENSMUST00000200632 547 ntBASIC16.88■□□□□ 0.29
RoraP51448 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.88■□□□□ 0.29
RoraP51448 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.88■□□□□ 0.29
RoraP51448 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.88■□□□□ 0.29
RoraP51448 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RoraP51448 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RoraP51448 Mir5122-201ENSMUST00000175004 89 ntBASIC16.87■□□□□ 0.29
RoraP51448 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.87■□□□□ 0.29
RoraP51448 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RoraP51448 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RoraP51448 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.87■□□□□ 0.29
RoraP51448 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RoraP51448 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.86■□□□□ 0.29
RoraP51448 Mir6349-201ENSMUST00000184059 97 ntBASIC16.86■□□□□ 0.29
RoraP51448 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.86■□□□□ 0.29
RoraP51448 Gm42545-201ENSMUST00000202755 922 ntBASIC16.86■□□□□ 0.29
RoraP51448 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RoraP51448 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RoraP51448 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RoraP51448 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RoraP51448 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.85■□□□□ 0.29
RoraP51448 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.85■□□□□ 0.29
RoraP51448 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.85■□□□□ 0.29
RoraP51448 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RoraP51448 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RoraP51448 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RoraP51448 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RoraP51448 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RoraP51448 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RoraP51448 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RoraP51448 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RoraP51448 Gm15565-201ENSMUST00000118890 427 ntBASIC16.84■□□□□ 0.29
RoraP51448 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RoraP51448 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.84■□□□□ 0.29
RoraP51448 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.84■□□□□ 0.29
RoraP51448 Gm37292-201ENSMUST00000192062 758 ntBASIC16.84■□□□□ 0.29
RoraP51448 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.84■□□□□ 0.29
RoraP51448 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RoraP51448 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RoraP51448 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RoraP51448 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms