Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Gm12382-201ENSMUST00000122005 922 ntBASIC18.14■□□□□ 0.49
Lhx3P50481 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.14■□□□□ 0.49
Lhx3P50481 Gm29791-202ENSMUST00000207888 369 ntBASIC18.14■□□□□ 0.49
Lhx3P50481 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Lhx3P50481 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.13■□□□□ 0.49
Lhx3P50481 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Lhx3P50481 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.13■□□□□ 0.49
Lhx3P50481 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.13■□□□□ 0.49
Lhx3P50481 Mir1199-201ENSMUST00000117015 119 ntBASIC18.13■□□□□ 0.49
Lhx3P50481 Gm13401-201ENSMUST00000117074 291 ntBASIC18.13■□□□□ 0.49
Lhx3P50481 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.13■□□□□ 0.49
Lhx3P50481 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
Lhx3P50481 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Lhx3P50481 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lhx3P50481 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Gm10418-201ENSMUST00000100943 576 ntBASIC18.12■□□□□ 0.49
Lhx3P50481 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Lhx3P50481 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.12■□□□□ 0.49
Lhx3P50481 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.12■□□□□ 0.49
Lhx3P50481 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.12■□□□□ 0.49
Lhx3P50481 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.12■□□□□ 0.49
Lhx3P50481 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lhx3P50481 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.12■□□□□ 0.49
Lhx3P50481 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lhx3P50481 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lhx3P50481 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Lhx3P50481 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.11■□□□□ 0.49
Lhx3P50481 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Gm6576-201ENSMUST00000169678 883 ntBASIC18.11■□□□□ 0.49
Lhx3P50481 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.11■□□□□ 0.49
Lhx3P50481 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Idnk-204ENSMUST00000226010 1898 ntBASIC18.11■□□□□ 0.49
Lhx3P50481 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lhx3P50481 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Lhx3P50481 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Lhx3P50481 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.1■□□□□ 0.49
Lhx3P50481 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.1■□□□□ 0.49
Lhx3P50481 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Lhx3P50481 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.1■□□□□ 0.49
Lhx3P50481 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.1■□□□□ 0.49
Lhx3P50481 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.1■□□□□ 0.49
Lhx3P50481 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lhx3P50481 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx3P50481 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx3P50481 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx3P50481 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx3P50481 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms