Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Hnf4aP49698 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.32■□□□□ 0.36
Hnf4aP49698 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.32■□□□□ 0.36
Hnf4aP49698 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Hnf4aP49698 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hnf4aP49698 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Hnf4aP49698 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.31■□□□□ 0.36
Hnf4aP49698 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.31■□□□□ 0.36
Hnf4aP49698 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.31■□□□□ 0.36
Hnf4aP49698 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Hnf4aP49698 Gm12933-201ENSMUST00000120203 872 ntBASIC17.31■□□□□ 0.36
Hnf4aP49698 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Gm37179-201ENSMUST00000194862 823 ntBASIC17.31■□□□□ 0.36
Hnf4aP49698 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Hnf4aP49698 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.31■□□□□ 0.36
Hnf4aP49698 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Hnf4aP49698 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.3■□□□□ 0.36
Hnf4aP49698 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hnf4aP49698 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hnf4aP49698 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.3■□□□□ 0.36
Hnf4aP49698 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.29■□□□□ 0.36
Hnf4aP49698 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Gm13148-201ENSMUST00000118892 745 ntBASIC17.29■□□□□ 0.36
Hnf4aP49698 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.29■□□□□ 0.36
Hnf4aP49698 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hnf4aP49698 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.28■□□□□ 0.36
Hnf4aP49698 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Hnf4aP49698 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.28■□□□□ 0.36
Hnf4aP49698 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.28■□□□□ 0.36
Hnf4aP49698 Gm26524-201ENSMUST00000192339 390 ntBASIC17.28■□□□□ 0.36
Hnf4aP49698 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hnf4aP49698 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Gm44549-201ENSMUST00000208351 577 ntBASIC17.27■□□□□ 0.36
Hnf4aP49698 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.27■□□□□ 0.36
Hnf4aP49698 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hnf4aP49698 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hnf4aP49698 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms