Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.16■□□□□ 0.18
Rfx3P48381 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx3P48381 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rfx3P48381 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.16■□□□□ 0.18
Rfx3P48381 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.16■□□□□ 0.18
Rfx3P48381 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx3P48381 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
Rfx3P48381 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfx3P48381 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.16■□□□□ 0.18
Rfx3P48381 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rfx3P48381 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfx3P48381 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfx3P48381 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rfx3P48381 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Rfx3P48381 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Nespas-201ENSMUST00000143738 1083 ntBASIC16.15■□□□□ 0.18
Rfx3P48381 AV356131-201ENSMUST00000206201 750 ntBASIC16.15■□□□□ 0.18
Rfx3P48381 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rfx3P48381 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfx3P48381 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rfx3P48381 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.14■□□□□ 0.17
Rfx3P48381 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.14■□□□□ 0.17
Rfx3P48381 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.14■□□□□ 0.17
Rfx3P48381 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Rfx3P48381 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Rfx3P48381 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rfx3P48381 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Rfx3P48381 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rfx3P48381 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Rfx3P48381 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.13■□□□□ 0.17
Rfx3P48381 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Rfx3P48381 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rfx3P48381 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx3P48381 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx3P48381 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.12■□□□□ 0.17
Rfx3P48381 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx3P48381 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.12■□□□□ 0.17
Rfx3P48381 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.12■□□□□ 0.17
Rfx3P48381 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rfx3P48381 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.12■□□□□ 0.17
Rfx3P48381 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rfx3P48381 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.11■□□□□ 0.17
Rfx3P48381 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rfx3P48381 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.11■□□□□ 0.17
Rfx3P48381 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rfx3P48381 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rfx3P48381 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rfx3P48381 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms