Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gli1P47806 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gli1P47806 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gli1P47806 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gli1P47806 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.41■□□□□ 0.38
Gli1P47806 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.41■□□□□ 0.38
Gli1P47806 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Gli1P47806 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.41■□□□□ 0.38
Gli1P47806 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.41■□□□□ 0.38
Gli1P47806 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.41■□□□□ 0.38
Gli1P47806 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.41■□□□□ 0.38
Gli1P47806 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.41■□□□□ 0.38
Gli1P47806 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Gli1P47806 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gli1P47806 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Gli1P47806 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Gm12527-201ENSMUST00000117967 564 ntBASIC17.4■□□□□ 0.38
Gli1P47806 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Gli1P47806 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Gm10252-201ENSMUST00000209541 832 ntBASIC17.4■□□□□ 0.38
Gli1P47806 Gm6365-201ENSMUST00000054711 744 ntBASIC17.4■□□□□ 0.38
Gli1P47806 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Gli1P47806 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gli1P47806 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Gli1P47806 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.39■□□□□ 0.37
Gli1P47806 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gli1P47806 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gli1P47806 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli1P47806 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Gli1P47806 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.38■□□□□ 0.37
Gli1P47806 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Gli1P47806 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.38■□□□□ 0.37
Gli1P47806 Gm38205-201ENSMUST00000192243 258 ntBASIC17.38■□□□□ 0.37
Gli1P47806 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.38■□□□□ 0.37
Gli1P47806 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli1P47806 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gli1P47806 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms