Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.1■□□□□ 0.33
Sox18P43680 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.1■□□□□ 0.33
Sox18P43680 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Sox18P43680 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Sox18P43680 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Iqck-206ENSMUST00000208658 2891 ntBASIC17.09■□□□□ 0.33
Sox18P43680 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Sox18P43680 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.09■□□□□ 0.33
Sox18P43680 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox18P43680 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Gm5867-201ENSMUST00000063197 592 ntBASIC17.09■□□□□ 0.33
Sox18P43680 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.09■□□□□ 0.33
Sox18P43680 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.09■□□□□ 0.33
Sox18P43680 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sox18P43680 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox18P43680 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.08■□□□□ 0.32
Sox18P43680 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.08■□□□□ 0.32
Sox18P43680 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sox18P43680 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.08■□□□□ 0.32
Sox18P43680 Gm17807-201ENSMUST00000186869 298 ntBASIC17.08■□□□□ 0.32
Sox18P43680 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sox18P43680 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.07■□□□□ 0.32
Sox18P43680 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sox18P43680 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.07■□□□□ 0.32
Sox18P43680 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sox18P43680 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.07■□□□□ 0.32
Sox18P43680 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sox18P43680 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Sox18P43680 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.06■□□□□ 0.32
Sox18P43680 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Sox18P43680 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.06■□□□□ 0.32
Sox18P43680 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Sox18P43680 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox18P43680 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Sox18P43680 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Gm12085-201ENSMUST00000119263 940 ntBASIC17.05■□□□□ 0.32
Sox18P43680 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.05■□□□□ 0.32
Sox18P43680 Gm18669-201ENSMUST00000216049 778 ntBASIC17.05■□□□□ 0.32
Sox18P43680 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.05■□□□□ 0.32
Sox18P43680 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Sox18P43680 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Sox18P43680 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sox18P43680 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sox18P43680 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sox18P43680 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sox18P43680 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.04■□□□□ 0.32
Sox18P43680 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.04■□□□□ 0.32
Sox18P43680 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.04■□□□□ 0.32
Sox18P43680 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.04■□□□□ 0.32
Sox18P43680 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sox18P43680 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms