Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Ank2-226ENSMUST00000189368 339 ntBASIC17.01■□□□□ 0.31
Cdx2P43241 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdx2P43241 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.01■□□□□ 0.31
Cdx2P43241 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdx2P43241 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdx2P43241 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Gm9103-201ENSMUST00000119371 405 ntBASIC17■□□□□ 0.31
Cdx2P43241 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17■□□□□ 0.31
Cdx2P43241 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdx2P43241 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdx2P43241 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.99■□□□□ 0.31
Cdx2P43241 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.99■□□□□ 0.31
Cdx2P43241 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdx2P43241 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdx2P43241 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdx2P43241 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdx2P43241 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdx2P43241 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdx2P43241 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.98■□□□□ 0.31
Cdx2P43241 Gm16061-201ENSMUST00000122167 857 ntBASIC16.98■□□□□ 0.31
Cdx2P43241 Gm25016-201ENSMUST00000158399 131 ntBASIC16.98■□□□□ 0.31
Cdx2P43241 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdx2P43241 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdx2P43241 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdx2P43241 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.97■□□□□ 0.31
Cdx2P43241 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdx2P43241 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdx2P43241 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.97■□□□□ 0.31
Cdx2P43241 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdx2P43241 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdx2P43241 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cdx2P43241 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.96■□□□□ 0.31
Cdx2P43241 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdx2P43241 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cdx2P43241 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.96■□□□□ 0.3
Cdx2P43241 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.96■□□□□ 0.3
Cdx2P43241 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.96■□□□□ 0.3
Cdx2P43241 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Cdx2P43241 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Cdx2P43241 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cdx2P43241 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdx2P43241 Gm7638-201ENSMUST00000121348 967 ntBASIC16.95■□□□□ 0.3
Cdx2P43241 Gm7284-201ENSMUST00000131667 944 ntBASIC16.95■□□□□ 0.3
Cdx2P43241 Gm7791-201ENSMUST00000219066 539 ntBASIC16.95■□□□□ 0.3
Cdx2P43241 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdx2P43241 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdx2P43241 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdx2P43241 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdx2P43241 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.94■□□□□ 0.3
Cdx2P43241 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms