Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd27P41272 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cd27P41272 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cd27P41272 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.33□□□□□ -0.12
Cd27P41272 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd27P41272 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cd27P41272 Gm5643-201ENSMUST00000117081 966 ntBASIC14.32□□□□□ -0.12
Cd27P41272 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.32□□□□□ -0.12
Cd27P41272 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.32□□□□□ -0.12
Cd27P41272 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.32□□□□□ -0.12
Cd27P41272 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Cd27P41272 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd27P41272 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd27P41272 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Cd27P41272 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cd27P41272 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.31□□□□□ -0.12
Cd27P41272 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cd27P41272 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cd27P41272 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cd27P41272 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Cd27P41272 Gm20760-201ENSMUST00000179197 648 ntBASIC14.31□□□□□ -0.12
Cd27P41272 Gm10138-203ENSMUST00000206952 366 ntBASIC14.31□□□□□ -0.12
Cd27P41272 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cd27P41272 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cd27P41272 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cd27P41272 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cd27P41272 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd27P41272 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.31□□□□□ -0.12
Cd27P41272 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.3□□□□□ -0.12
Cd27P41272 Gm15375-201ENSMUST00000119510 849 ntBASIC14.3□□□□□ -0.12
Cd27P41272 Gm10698-201ENSMUST00000182663 604 ntBASIC14.3□□□□□ -0.12
Cd27P41272 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd27P41272 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd27P41272 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.3□□□□□ -0.12
Cd27P41272 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Cd27P41272 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cd27P41272 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd27P41272 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.29□□□□□ -0.12
Cd27P41272 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Cd27P41272 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.29□□□□□ -0.12
Cd27P41272 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cd27P41272 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.28□□□□□ -0.12
Cd27P41272 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Cd27P41272 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Cd27P41272 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.28□□□□□ -0.12
Cd27P41272 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.28□□□□□ -0.12
Cd27P41272 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Cd27P41272 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd27P41272 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms