Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Abca1P41233 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.81□□□□□ -0.04
Abca1P41233 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Abca1P41233 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Abca1P41233 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Gm43183-201ENSMUST00000200632 547 ntBASIC14.8□□□□□ -0.04
Abca1P41233 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.8□□□□□ -0.04
Abca1P41233 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Abca1P41233 Zfp783-201ENSMUST00000095946 670 ntBASIC14.8□□□□□ -0.04
Abca1P41233 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Abca1P41233 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Abca1P41233 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Abca1P41233 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.79□□□□□ -0.04
Abca1P41233 Mtag2-201ENSMUST00000058665 714 ntBASIC14.79□□□□□ -0.04
Abca1P41233 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.79□□□□□ -0.04
Abca1P41233 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Abca1P41233 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Abca1P41233 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.78□□□□□ -0.04
Abca1P41233 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.78□□□□□ -0.04
Abca1P41233 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Abca1P41233 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Abca1P41233 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Abca1P41233 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.77□□□□□ -0.04
Abca1P41233 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.77□□□□□ -0.04
Abca1P41233 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.77□□□□□ -0.04
Abca1P41233 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Abca1P41233 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Abca1P41233 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Abca1P41233 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Abca1P41233 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Abca1P41233 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.77□□□□□ -0.05
Abca1P41233 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Abca1P41233 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms