Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Timp3P39876 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Timp3P39876 Flg-201ENSMUST00000050758 1488 ntBASIC14.63□□□□□ -0.07
Timp3P39876 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Timp3P39876 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Timp3P39876 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.62□□□□□ -0.07
Timp3P39876 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.62□□□□□ -0.07
Timp3P39876 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.62□□□□□ -0.07
Timp3P39876 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.62□□□□□ -0.07
Timp3P39876 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.62□□□□□ -0.07
Timp3P39876 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Timp3P39876 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.61□□□□□ -0.07
Timp3P39876 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Timp3P39876 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.61□□□□□ -0.07
Timp3P39876 Gm13158-201ENSMUST00000122007 736 ntBASIC14.61□□□□□ -0.07
Timp3P39876 Gm6576-201ENSMUST00000169678 883 ntBASIC14.61□□□□□ -0.07
Timp3P39876 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.61□□□□□ -0.07
Timp3P39876 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Timp3P39876 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.6□□□□□ -0.07
Timp3P39876 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Timp3P39876 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.6□□□□□ -0.07
Timp3P39876 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC14.6□□□□□ -0.07
Timp3P39876 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Gm15378-201ENSMUST00000121894 207 ntBASIC14.6□□□□□ -0.07
Timp3P39876 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Gm22325-201ENSMUST00000158904 308 ntBASIC14.6□□□□□ -0.07
Timp3P39876 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.6□□□□□ -0.07
Timp3P39876 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.6□□□□□ -0.07
Timp3P39876 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Timp3P39876 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Timp3P39876 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Timp3P39876 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Timp3P39876 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Timp3P39876 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Timp3P39876 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Timp3P39876 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Timp3P39876 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.59□□□□□ -0.07
Timp3P39876 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.59□□□□□ -0.07
Timp3P39876 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.59□□□□□ -0.07
Timp3P39876 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.59□□□□□ -0.07
Timp3P39876 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.59□□□□□ -0.07
Timp3P39876 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Timp3P39876 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Timp3P39876 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Timp3P39876 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.58□□□□□ -0.07
Timp3P39876 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Timp3P39876 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.58□□□□□ -0.08
Timp3P39876 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Timp3P39876 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Timp3P39876 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.58□□□□□ -0.08
Timp3P39876 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Timp3P39876 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Timp3P39876 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.58□□□□□ -0.08
Timp3P39876 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.58□□□□□ -0.08
Timp3P39876 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.58□□□□□ -0.08
Timp3P39876 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.58□□□□□ -0.08
Timp3P39876 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.58□□□□□ -0.08
Timp3P39876 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Timp3P39876 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms