Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp13P33435 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp13P33435 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp13P33435 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Mmp13P33435 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp13P33435 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Mmp13P33435 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Mmp13P33435 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp13P33435 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mmp13P33435 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.28■□□□□ 0.52
Mmp13P33435 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Mmp13P33435 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Gm7290-201ENSMUST00000104990 617 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp13P33435 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.28■□□□□ 0.52
Mmp13P33435 Gm12918-201ENSMUST00000120234 636 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 Gm15710-201ENSMUST00000121821 636 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Mmp13P33435 Gm5075-201ENSMUST00000196916 622 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Mmp13P33435 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.28■□□□□ 0.52
Mmp13P33435 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Mmp13P33435 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Mmp13P33435 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Mmp13P33435 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.27■□□□□ 0.52
Mmp13P33435 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.27■□□□□ 0.52
Mmp13P33435 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Mmp13P33435 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp13P33435 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp13P33435 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.27■□□□□ 0.51
Mmp13P33435 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Mmp13P33435 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Mmp13P33435 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.26■□□□□ 0.51
Mmp13P33435 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.26■□□□□ 0.51
Mmp13P33435 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mmp13P33435 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Mmp13P33435 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.26■□□□□ 0.51
Mmp13P33435 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.26■□□□□ 0.51
Mmp13P33435 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Mmp13P33435 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Mmp13P33435 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Mmp13P33435 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.25■□□□□ 0.51
Mmp13P33435 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Mmp13P33435 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Mmp13P33435 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.24■□□□□ 0.51
Mmp13P33435 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Mmp13P33435 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Mmp13P33435 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Mmp13P33435 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.24■□□□□ 0.51
Mmp13P33435 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms