Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.19■□□□□ 0.66
Mmp3P28862 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Mmp3P28862 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.19■□□□□ 0.66
Mmp3P28862 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mmp3P28862 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Mmp3P28862 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp3P28862 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mmp3P28862 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Mmp3P28862 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mmp3P28862 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.18■□□□□ 0.66
Mmp3P28862 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.18■□□□□ 0.66
Mmp3P28862 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mmp3P28862 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp3P28862 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp3P28862 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp3P28862 Gm7889-201ENSMUST00000185591 958 ntBASIC19.17■□□□□ 0.66
Mmp3P28862 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp3P28862 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.16■□□□□ 0.66
Mmp3P28862 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.16■□□□□ 0.66
Mmp3P28862 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Mmp3P28862 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp3P28862 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Mmp3P28862 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.16■□□□□ 0.66
Mmp3P28862 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.15■□□□□ 0.66
Mmp3P28862 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.15■□□□□ 0.66
Mmp3P28862 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp3P28862 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp3P28862 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp3P28862 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp3P28862 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp3P28862 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp3P28862 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.14■□□□□ 0.65
Mmp3P28862 Gm4974-201ENSMUST00000209974 875 ntBASIC19.14■□□□□ 0.65
Mmp3P28862 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Mmp3P28862 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp3P28862 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.13■□□□□ 0.65
Mmp3P28862 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Gm13401-201ENSMUST00000117074 291 ntBASIC19.13■□□□□ 0.65
Mmp3P28862 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp3P28862 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp3P28862 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Mmp3P28862 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp3P28862 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Mmp3P28862 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Gm10418-201ENSMUST00000100943 576 ntBASIC19.12■□□□□ 0.65
Mmp3P28862 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Mmp3P28862 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Mmp3P28862 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Mmp3P28862 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Mmp3P28862 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp3P28862 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Mmp3P28862 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.11■□□□□ 0.65
Mmp3P28862 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.11■□□□□ 0.65
Mmp3P28862 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms