Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Irf8P23611 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Irf8P23611 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.3■□□□□ 0.68
Irf8P23611 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.3■□□□□ 0.68
Irf8P23611 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.3■□□□□ 0.68
Irf8P23611 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Irf8P23611 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.3■□□□□ 0.68
Irf8P23611 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Irf8P23611 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Irf8P23611 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Irf8P23611 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Irf8P23611 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Irf8P23611 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.28■□□□□ 0.68
Irf8P23611 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.28■□□□□ 0.68
Irf8P23611 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.28■□□□□ 0.68
Irf8P23611 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Irf8P23611 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.27■□□□□ 0.68
Irf8P23611 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Irf8P23611 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Irf8P23611 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.27■□□□□ 0.68
Irf8P23611 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.27■□□□□ 0.68
Irf8P23611 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.27■□□□□ 0.68
Irf8P23611 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Irf8P23611 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.27■□□□□ 0.68
Irf8P23611 Gm18025-201ENSMUST00000221733 862 ntBASIC19.27■□□□□ 0.68
Irf8P23611 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Irf8P23611 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Irf8P23611 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Irf8P23611 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Irf8P23611 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Irf8P23611 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Irf8P23611 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Irf8P23611 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Irf8P23611 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.26■□□□□ 0.67
Irf8P23611 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Irf8P23611 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.25■□□□□ 0.67
Irf8P23611 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Irf8P23611 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Irf8P23611 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Irf8P23611 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Irf8P23611 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Irf8P23611 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.24■□□□□ 0.67
Irf8P23611 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Gm8520-201ENSMUST00000186517 868 ntBASIC19.24■□□□□ 0.67
Irf8P23611 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.24■□□□□ 0.67
Irf8P23611 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Irf8P23611 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms