Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp53P15975 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp53P15975 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Usp53P15975 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp53P15975 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp53P15975 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp53P15975 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.69■□□□□ 0.9
Usp53P15975 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp53P15975 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp53P15975 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp53P15975 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp53P15975 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp53P15975 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp53P15975 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Usp53P15975 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp53P15975 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.68■□□□□ 0.9
Usp53P15975 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp53P15975 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp53P15975 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Usp53P15975 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.67■□□□□ 0.9
Usp53P15975 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Gm5417-201ENSMUST00000079706 384 ntBASIC20.67■□□□□ 0.9
Usp53P15975 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC20.67■□□□□ 0.9
Usp53P15975 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp53P15975 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.66■□□□□ 0.9
Usp53P15975 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Usp53P15975 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Usp53P15975 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.65■□□□□ 0.9
Usp53P15975 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp53P15975 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Usp53P15975 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Usp53P15975 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp53P15975 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.65■□□□□ 0.9
Usp53P15975 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Usp53P15975 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp53P15975 Grk6-206ENSMUST00000224995 2971 ntBASIC20.64■□□□□ 0.9
Usp53P15975 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Usp53P15975 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp53P15975 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Usp53P15975 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Usp53P15975 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.64■□□□□ 0.9
Usp53P15975 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Usp53P15975 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.64■□□□□ 0.89
Usp53P15975 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.64■□□□□ 0.89
Usp53P15975 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.64■□□□□ 0.89
Usp53P15975 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Usp53P15975 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Usp53P15975 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp53P15975 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Usp53P15975 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.63■□□□□ 0.89
Usp53P15975 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Usp53P15975 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.63■□□□□ 0.89
Usp53P15975 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Usp53P15975 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Usp53P15975 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms