Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.91■□□□□ 0.14
P06344 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
P06344 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
P06344 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.91■□□□□ 0.14
P06344 Gm10138-203ENSMUST00000206952 366 ntBASIC15.91■□□□□ 0.14
P06344 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
P06344 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
P06344 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.91■□□□□ 0.14
P06344 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
P06344 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
P06344 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
P06344 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.9■□□□□ 0.14
P06344 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
P06344 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
P06344 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
P06344 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.89■□□□□ 0.13
P06344 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
P06344 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
P06344 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.89■□□□□ 0.13
P06344 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.88■□□□□ 0.13
P06344 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
P06344 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.88■□□□□ 0.13
P06344 Gm15375-201ENSMUST00000119510 849 ntBASIC15.88■□□□□ 0.13
P06344 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.88■□□□□ 0.13
P06344 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
P06344 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
P06344 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
P06344 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.87■□□□□ 0.13
P06344 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.87■□□□□ 0.13
P06344 Gm10252-201ENSMUST00000209541 832 ntBASIC15.87■□□□□ 0.13
P06344 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.87■□□□□ 0.13
P06344 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
P06344 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
P06344 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
P06344 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.87■□□□□ 0.13
P06344 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
P06344 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.86■□□□□ 0.13
P06344 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
P06344 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.86■□□□□ 0.13
P06344 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.86■□□□□ 0.13
P06344 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.86■□□□□ 0.13
P06344 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.86■□□□□ 0.13
P06344 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
P06344 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms