Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt1P04104 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.96■□□□□ 0.31
Krt1P04104 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Krt1P04104 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt1P04104 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Krt1P04104 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Krt1P04104 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Krt1P04104 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Krt1P04104 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.95■□□□□ 0.3
Krt1P04104 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.95■□□□□ 0.3
Krt1P04104 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Krt1P04104 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Krt1P04104 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Krt1P04104 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Krt1P04104 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Krt1P04104 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Krt1P04104 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Krt1P04104 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
Krt1P04104 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Krt1P04104 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Krt1P04104 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.93■□□□□ 0.3
Krt1P04104 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt1P04104 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Krt1P04104 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.93■□□□□ 0.3
Krt1P04104 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.93■□□□□ 0.3
Krt1P04104 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Krt1P04104 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Krt1P04104 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.92■□□□□ 0.3
Krt1P04104 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Krt1P04104 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.92■□□□□ 0.3
Krt1P04104 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Krt1P04104 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt1P04104 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.91■□□□□ 0.3
Krt1P04104 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Krt1P04104 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Krt1P04104 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Krt1P04104 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Krt1P04104 Haglr-201ENSMUST00000100000 2085 ntBASIC16.9■□□□□ 0.3
Krt1P04104 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.9■□□□□ 0.3
Krt1P04104 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt1P04104 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Krt1P04104 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Krt1P04104 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Krt1P04104 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Krt1P04104 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms