Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sp1O89090 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sp1O89090 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sp1O89090 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sp1O89090 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sp1O89090 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.09■□□□□ 0.49
Sp1O89090 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.09■□□□□ 0.49
Sp1O89090 Gm5417-201ENSMUST00000079706 384 ntBASIC18.09■□□□□ 0.49
Sp1O89090 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sp1O89090 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.09■□□□□ 0.49
Sp1O89090 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.09■□□□□ 0.49
Sp1O89090 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sp1O89090 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Sp1O89090 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sp1O89090 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Sp1O89090 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sp1O89090 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.08■□□□□ 0.48
Sp1O89090 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.08■□□□□ 0.48
Sp1O89090 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.08■□□□□ 0.48
Sp1O89090 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Sp1O89090 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sp1O89090 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sp1O89090 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Gm10517-202ENSMUST00000192970 758 ntBASIC18.07■□□□□ 0.48
Sp1O89090 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sp1O89090 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.06■□□□□ 0.48
Sp1O89090 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp1O89090 Gm13401-201ENSMUST00000117074 291 ntBASIC18.06■□□□□ 0.48
Sp1O89090 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.06■□□□□ 0.48
Sp1O89090 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.06■□□□□ 0.48
Sp1O89090 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.06■□□□□ 0.48
Sp1O89090 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.06■□□□□ 0.48
Sp1O89090 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sp1O89090 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp1O89090 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sp1O89090 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp1O89090 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sp1O89090 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Sp1O89090 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.05■□□□□ 0.48
Sp1O89090 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.05■□□□□ 0.48
Sp1O89090 Timm23-208ENSMUST00000226683 750 ntBASIC18.05■□□□□ 0.48
Sp1O89090 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Sp1O89090 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Sp1O89090 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sp1O89090 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.04■□□□□ 0.48
Sp1O89090 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sp1O89090 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.04■□□□□ 0.48
Sp1O89090 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Sp1O89090 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.04■□□□□ 0.48
Sp1O89090 Gm29791-202ENSMUST00000207888 369 ntBASIC18.04■□□□□ 0.48
Sp1O89090 Odf3b-204ENSMUST00000227834 930 ntBASIC18.04■□□□□ 0.48
Sp1O89090 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.04■□□□□ 0.48
Sp1O89090 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sp1O89090 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms