Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.65□□□□□ -0.38
Sh2d1aO88890 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.65□□□□□ -0.38
Sh2d1aO88890 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sh2d1aO88890 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Sh2d1aO88890 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.65□□□□□ -0.39
Sh2d1aO88890 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.64□□□□□ -0.39
Sh2d1aO88890 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sh2d1aO88890 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.64□□□□□ -0.39
Sh2d1aO88890 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sh2d1aO88890 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Gm10849-201ENSMUST00000100397 618 ntBASIC12.63□□□□□ -0.39
Sh2d1aO88890 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sh2d1aO88890 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.62□□□□□ -0.39
Sh2d1aO88890 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.62□□□□□ -0.39
Sh2d1aO88890 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh2d1aO88890 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.61□□□□□ -0.39
Sh2d1aO88890 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms